Symbols and abbreviations Free
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Published:20 Apr 2016
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Special Collection: 2016 ebook collection
Nuclear Magnetic Resonance: Volume 45, ed. V. Ramesh, The Royal Society of Chemistry, 2016, vol. 45, pp. P011-P018.
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These lists contain the symbols and abbreviations most frequently used in this volume, but they are not expected to be exhaustive. Some specialized notation is only defined in the relevant chapter. An attempt has been made to standardize usage throughout the volume as far as is feasible, but it must be borne in mind that the original research literature certainly is not standardized in this way, and some difficulties may arise from this fact. Trivial use of subscripts etc. is not always mentioned in the symbols listed below. Some of the other symbols used in the text, e.g. for physical constants such as h or π, or for the thermodynamic quantities such as H or S, are not included in the list since they are considered to follow completely accepted usage.
Symbols
- aN
hyperline (electron–nucleus) interaction constant
- A
(i) hyperfine (electron–nucleus) interaction constant
(ii) parameter relating to electric field effects on nuclear shielding
- B
(i) magnetic induction field (magnetic flux density)
(ii) parameter relating to electric field effects on nuclear shielding
- B0
static magnetic field of NMR or ESR spectrometer
- B1, B2
r.f. magnetic fields associated with v1, v2
- Cx
spin-rotation coupling constant of nucleus X (used sometimes in tensor form): C2=1/3(C+2C)
- C||, C⊥
components of C parallel and perpendicular to a molecular symmetry axis
- D
(i) self-diffusion coefficient
(ii) zero-field splitting constant
- D
rotational diffusion tensor
- D||, D⊥
components of D parallel and perpendicular to a molecular symmetry axis
- Dint
internal diffusion coefficient
- D0
overall isotropic diffusion coefficient
- E
electric field
- En
eigenvalue of ̂ (or a contribution to ̂)
- g
nuclear or electronic g-factor
- G
magnetic field gradient
- Hij
element of matrix representation of
-
Hamiltonian operator-subscripts indicate its nature
- Ii
nuclear spin operator for nucleus i
- Iix, Iiy, Iiz
components of Ii
- I
(i) ionization potential
(ii) moment of inertia
- nJ
nuclear spin–spin coupling constant through n bonds (in Hz). Further information may be given by subscripts or in brackets. Brackets are used for indicating the species of nuclei coupled, e.g. J (13C, 1H) or additionally, the coupling path, e.g. J(POCF)
- Jr
reduced splitting observed in a double resonance experiment
- J
rotational quantum number
- nK
reduced nuclear spin–spin coupling constant (see the notes concerning nJ)
- mi
eigenvalue of Iiz (magnetic component quantum number)
- M0
equilibrium macroscopic magnetization of a spin system in the presence of B0
- Mx, My, Mz
components of macroscopic magnetization
- Mn
the number of average mol. wt.
- PA
valence p orbital of atom A
- Pi
fractional population (or rotamers etc.)
- Puv
element of bond-order, charge-density matrix
- q
electric field gradient
- Q
(i) nuclear quadrupole moment
(ii) quality factor for an r.f. coil
- sA
valence s-orbital of atom A
- S(0)
electron density in SA at nuclear A
- S
(i) singlet state
(ii) electron (or, occasionally, nuclear spin) cf. I
(iii) ordering parameter for oriented systems
(iv) overlap integral between molecular orbitals
- t
elapsed time
- T
(i) temperature
(ii) triplet state
- Tc
coalescence temperature for an NMR spectrum
- Tg
the glass transition temperature (of a polymer)
- T
spin–lattice relaxation time of the X nuclei (further subscripts refer to the relaxation mechanism)
- T
spin–spin relaxation time of the X nucleus (further subscripts refer to the relaxation mechanism)
- T
inhomogeneity contribution to dephasing time for Mx or My
- T
total dephasing time for Mx or My; (T)−1=T2−1+ (T2′)−1
- T3
decay time following 900–τ–9090 pulse sequences
- T,T
spin–lattice and spin–spin relaxation time of the X nuclei in the frame of reference rotating with B1
- T1D
dipolar spin–lattice relaxation time
- Xi
mole fraction of compound
- ZA
atomic number of atom A
- α
(i) nuclear spin wavefunction (eigenfunction of Iz) for a spin –1/2 nucleus
(ii) polarizability
- β
nuclear spin wavefunction (eigenfunction of Iz) for a spin−½ nucleus
- γX
magnetogyric ratio of nucleus X
- δX
chemical shift of a nucleus of element X (positive when the sample resonates to high frequency of the reference). Usually in p.p.m.
- δij
Kronecker delta (=1 if i=j, and =0 otherwise)
- δ(rKA)
Dirac delta operator
- Δ
(i) time between field gradient pulses
(ii) spectral width
- ΔJ
anisotropy in J(ΔJ=J||J⊥, for axial symmetry)
- Δn
population difference between nuclear states
- Δδ
change of difference in δ
- ΔV½
full width (in Hz) of a resonance line at half-height
- Δσ
(i) anisotropy in σ(Δσ=σ||–σ⊥, for axial symmetry)
(ii) differences in σ for two different situations
- Δχ
(i) susceptibility anisotropy (Δχ=χ||–χ⊥, for axial symmetry)
(ii) differences in electronegativities
- ɛr
relative permittivity
- ɛ0
permittivity of a vacuum
- η
(i) nuclear Overhauser effect
(ii) asymmetry factor (e.g. in e2qQ/h)
(iii) refractive index
(iv) viscosity
- μ
magnetic dipole moment
- μ0
permeability of a vacuum
- μB
Bohr magneton
- μN
nuclear magneton
- vi
Larmor precession frequency of nucleus i (in Hz)
- v0
(i) spectrometer operating frequency
(ii) Larmor precession frequency (general, or of bare nucleus)
- v1
frequency of ‘observing’ r.f. magnetic field
- v2
frequency of ‘irradiating’ r.f. magnetic field
- σi
shielding parameter of nucleus i (used sometimes in tensor form). Usually in p.p.m. Subscripts may alternatively indicate contributions to σ.
- σ||, σ⊥
components of σ parallel and perpendicular to a molecular symmetry axis
- σd
diagrammatic contribution to σ
- σp
paramagnetic contribution to σ
- τ
(i) pre-exchange lifetime of molecular species
(ii) time between r.f. pulses (general symbol)
- τc
correlation time
- τcoll
mean time between molecular collisions in the liquid state
- τj
angular momentum correlation time
- τp
pulse duration
- τt
translational magnetic relaxation correlation time
- χ
(i) magnetic susceptibility
(ii) electronegativity
(iii) nuclear quadrupole coupling constant (=e2qQ/h)
- ω
carrier frequency in rad s−1
- ωi, ω0, ω1, ω2
as for vi, v0, v1, v2 but in rad s−1
- ωm
modulation angular frequency (in rad s−1)
- ωr
sample rotation (rad −1)
Abbreviations
(a) Physical properties
- a.f.
audiofrequency
- a.u.
atomic unit
- a.m.
amplitude modulation
- b.c.c.
body-centred cubic
- c.m.c.
critical micelle concentration
- e.d.
electron diffraction
- e.f.g.
electric field gradient
- f.c.c.
face-centred cubic
- f.m.
frequency modulation
- h.c.p.
hexagonal close-packed
- h.f.
hyperfine
- i.d.
inside diameter
- i.f.
intermediate frequency
- l.c.
liquid crystalline
- mol.wt.
molecular weight
- o.d.
outside diameter
- p.p.m.
parts per million
- r.f.
radiofrequency
- r.m.s.
root mean square
- s.h.f.
super-high frequency
- u.h.f.
ultra-high frequency
- ADC
analogue-to-digital converter
- AEE
average excitation energy approximation
- AQ
acquire
- ARP
adiabatic rapid passage
- BIRD
bilinear rotation decoupling
- CCPPA
coupled cluster polarization propagator approximation
- CH-COSY
carbon–hydrogen correlation spectroscopy
- CHESS
chemical shift selection
- CHF
coupled Hartree–Fock molecular orbital calculations
- CIDEP
chemically induced dynamic electron polarization
- CIDNP
chemically induced dynamic nuclear polarization
- COSY
correlation spectroscopy
- CP
cross polarization
- CPMG
Carr–Purcell pulse sequence. Meiboom–Gill modification
- CSA
chemical shielding anisotropy
- CSI
chemical shift imaging
- CW
continuous wave
- DAC
digital-to-analogue converter
- DD
dipole–dipole (interaction or relaxation mechanism)
- DEPT
distortionless enhancement by polarization transfer
- DLB
differential line broadening
- DNP
dynamic nuclear polarization
- DQ
double quantum
- DQF
double quantum filter
- ECOSY
exclusive correlation spectroscopy
- EHT
extended Hückel molecular orbital theory
- ENDOR
electron–nucleus double resonance
- EOM
equations of motion
- ESR
electron spin resonance
- EXSY
exchange spectroscopy
- FC
Fermi contact
- FID
free induction decay
- FLASH
fast low angle shot
- FPT
finite perturbation theory
- FT
Fourier transform
- GIAO
gauge included atomic orbitals
- HMQ
heteronuclear multiquantum
- HOHAHA
homonuclear Hartman–Hahn
- HRPA
higher random phased approximation
- IDESS
improved depth selective single surface coil spectroscopy
- IGLO
individual gauge for different localized orbitals
- INADE-QUATE
incredible natural abundance double quantum transfer experiment
- INDO
intermediate neglect of differential overlap
- INDO/S
intermediate neglect of differential overlap calculations for spectroscopy
- INDOR
internuclear double resonance
- INEPT
insensitive nuclei enhanced by polarization transfer
- IR
infrared
- ISIS
image selected in vivo spectroscopy
- LIS
lanthanide induced shift
- LORG
local origin
- LSR
lanthanide shift reagent
- MASS
magic angle sample spinning
- MBPT
many body perturbation theory
- MEM
maximum entropy method
- MINDO
modified INDO
- MQ
multiple quantum
- MQC
multiple quantum coherence
- MQF
multiple quantum filter
- NMR
nuclear magnetic resonance
- NOE
nuclear Overhauser enhancement
- NOESY
nuclear Overhauser enhancement spectroscopy
- NQCC
nuclear quadrupole coupling constant
- NQR
nuclear quadrupole resonance
- PFG
pulsed field gradient
- PRE
proton relaxation enhancement
- QF
quadrupole moment/field gradient
- QPD
quadrature phase detection
- REX
relativistically extended Hückel molecular orbital theory
- ROESY
rotating frame Overhauser enhancement spectroscopy
- RPA
random phase approximation
- SCPT
self consistent perturbation theory
- SD
spin dipolar
- SECSY
spin echo correlation spectroscopy
- SEFT
spin echo Fourier transform
- SLITDRESS
slice interleaved depth resolved surface coil spectroscopy
- SOPPA
second order polarization propagator approach
- SPI
selective population inversion
- SPT
selective population transfer
- SR
spin rotation (interaction or relaxation mechanism)
- TART
tip angle reduced T1 imaging
- TOCSY
total correlation spectroscopy
- UV
ultraviolet
- WAHUHA
Waugh, Huber and Häberlen (cycle of pulses)
- ZQ
zero quantum
- ZQC
zero quantum coherence
(b) Chemical species1
- acac
acetylacetonato
- ACTH
adrenocorticotropic hormone (corticotropin)
- ADP
adenosine diphosphate
- AMP
adenosine monophosphate
- ATP
adenosine triphosphate
- BSA
bovine serum albumin
- CMP
cytidine monophosphate
- cp
cyclopentadienyl
- DAP
dodecylammonium propionate
- DME
1,2-dimethoxyethane
- DMF
dimethylformamide
- DML
dimyristoyl-lecithin
- DMS
dimethylsiloxane
- DMSO
dimethyl sulfoxide
- DNA
deoxyribonucleic acid
- DPG
2,3-diphosphoglycerate
- DPI
dipalmitoyl-lecithin
- dpm
dipivaloylmethanato
- DPPH
diphenylpicrylhydrazyl
- DSS
2,2-dimethyl-2-silapentane-5-sulfonate (usually as the sodium salt)
- DTBN
di-t-butyl nitroxide
- EBBA
N-(p-ethoxybenzylidene)-p-butylaniline
- EDTA
ethylenediaminetetra-acetic acid
- EVA
ethylene-vinyl acetate
- fod
1,1,1,2,2,3,3-heptafluoro-7,7-dimethyloctane-4,6-dionato
- HAB
4,4′-bis(heptyl)azoxybenzene
- HMPA
hexamethylphosphoramide
- HOAB
p-n-heptyloxyazoxybenzene
- IHP
inositolhexaphosphate
- KDP
potassium dihydrogen phosphate
- MBBA
N-(p-methoxybenzylidene)-p-butylaniline
- NADH(P)
nicotinamide adenine dinucleotide (phosphate)
- NMF
N-methylformamide
- PAA
p-azoxyanisole
- PBA
pyrene butyric acid
- PBLG
poly(l-benzyl μ-glutamate)
- PC
phosphatidyl choline (lecithin)
- PCB
polychlorinated biphenyl
- PDMS
polydimethylsiloxane
- PMA
poly(methacrylic acid)
- PMMA
poly(methyl methacrylate)
- POM
poly(oxymethylene)
- PS
phosphatidylserine
- PTFE
polytetrafluoroethylene
- PVC
poly(vinyl chloride)
- PVF
poly(vinyl fluoride)
- PVP
poly(vinyl pyrrolidone)
- RNA
ribonucleic acid (tRNA, transfer RNA)
- SDS
sodium dodecyl sulfate
- TAB
trimethylammonium bromide
- TCNQ
tetracyanoquinodimethane
- TFA
trifluoroacetic acid
- THF
tetrahydrofuran
- TMS
tetramethylsilane
- UTP
uridine triphosphate
Amino-acid residues
Ala | alanine | Leu | leucine |
Arg | arginine | Lys | lysine |
Asn | asparagine | Met | methionine |
Asp | aspartic acid | Phe | phenylalanine |
Cys | cysteine | Pro | proline |
Gln | glutamine | Ser | serine |
Glu | glutamic acid | Thr | threonin |
Gly | glycine | Trp | tryptophan |
His | histidine | Tyr | tyrosine |
Hyp | hydroxyproline | Val | valine |
Ile | isoleucine |
Ala | alanine | Leu | leucine |
Arg | arginine | Lys | lysine |
Asn | asparagine | Met | methionine |
Asp | aspartic acid | Phe | phenylalanine |
Cys | cysteine | Pro | proline |
Gln | glutamine | Ser | serine |
Glu | glutamic acid | Thr | threonin |
Gly | glycine | Trp | tryptophan |
His | histidine | Tyr | tyrosine |
Hyp | hydroxyproline | Val | valine |
Ile | isoleucine |
Lower case initials are used when the species is a ligand.