The Comet Assay in Toxicology
Concerns about the adverse effects of chemicals present in the environment have created a need for better systems to assess their potential consequences on human health. One potential solution is the versatile and state-of-the-art Comet assay. Simple, sensitive, rapid and visual, this modern toxicological method allows quantitative and qualitative assessment of DNA damage in single cells. This assay is used in diverse fields ranging from clinical applications, human monitoring and environmental toxicology through to genetic toxicity testing.
This updated and revised edition of The Comet Assay in Toxicology provides the latest information on this important tool. It addresses, in-depth, the different protocols, statistical analyses and applications used worldwide. It also includes the guidelines recommended by the Working Group on Comet Assay. The book begins with a review of the genesis of the assay for those new to the technique and goes on to explain procedures followed to assess different types of DNA damage, various applications of the assay, and guidelines for the conduct of the assay in in vitro and in vivo systems. New chapters written for this edition will provide information on the most contemporary approaches and applications, including in silico approaches, on meta-analysis of data and on the application of the Comet Assay in nanotoxicology.
This book will serve as both a reference and a guide to students as well as investigators in the biomedical, biochemical and pharmaceutical sciences fields.
The Comet Assay in Toxicology, The Royal Society of Chemistry, 2016.
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Table of contents
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Chapter 1: The Comet Assay: A Versatile Tool for Assessing DNA Damagep1-64ByMahima Bajpayee;Mahima BajpayeeShakti Sadan, 8Arya NagarLucknow – 226004IndiaSearch for other works by this author on:Ashutosh Kumar;Ashutosh KumarInstitute of Life Sciences, Ahmedabad UniversityUniversity RoadAhmedabad – 380009IndiaSearch for other works by this author on:Alok DhawanAlok DhawanCSIR-Indian Institute of Toxicology ResearchVishvigyan Bhawan31-Mahatma Gandhi MargP.O. Box – 80Lucknow – 226001India[email protected]Search for other works by this author on:
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Chapter 2: High-throughput Measurement of DNA Breaks and Oxidised Bases with the Comet Assayp65-92ByAmaya Azqueta;Amaya AzquetaDepartment of Pharmacology and Toxicology, School of Pharmacy and Nutrition, University of NavarraPamplonaSpain[email protected]Search for other works by this author on:Isabele Campos Costa-Amaral;Isabele Campos Costa-AmaralCentro de Estudos da Saúde do Trabalhador e Ecologia Humana, Escola Nacional de Saúde Pública Sergio Arouca, Fundação Oswaldo Cruz (FIOCRUZ)Rio de JaneiroBrasilDepartment of Nutrition, University of OsloOsloNorwaySearch for other works by this author on:Andrew R. CollinsAndrew R. CollinsDepartment of Nutrition, University of OsloOsloNorwaySearch for other works by this author on:
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Chapter 3: Microplate-based Comet Assayp93-111ByElizabeth D. Wagner;Elizabeth D. WagnerDepartment of Crop Sciences, College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign366 NSRC; MC-6351101 West Peabody DriveUrbanaIL 61801USASearch for other works by this author on:Michael J. PlewaMichael J. PlewaDepartment of Crop Sciences, College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign366 NSRC; MC-6351101 West Peabody DriveUrbanaIL 61801USASearch for other works by this author on:
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Chapter 4: The Use of Higher Plants in the Comet Assayp112-133ByTomas Gichner;Tomas GichnerInstitute of Experimental Botany, Academy of Sciences of Czech RepublicNa Karlovce 1a16 000, Prague 6Czech RepublicSearch for other works by this author on:Irena Znidar;Irena ZnidarDepartment of Biology, Biotechnical Faculty, University of LjubljanaVecna pot 111SI-1000, LjubljanaSloveniaSearch for other works by this author on:Elizabeth D. Wagner;Elizabeth D. WagnerDepartment of Crop Sciences, College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign1101 West Peabody DriveUrbana, IL 61801USASearch for other works by this author on:Michael J. PlewaMichael J. PlewaDepartment of Crop Sciences, College of Agricultural, Consumer and Environmental Sciences, University of Illinois at Urbana-Champaign1101 West Peabody DriveUrbana, IL 61801USASearch for other works by this author on:
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Chapter 5: Methods for Freezing Blood Samples at −80 °C for DNA Damage Analysis in Human Leukocytesp134-142ByNarendra P. Singh;Narendra P. SinghDepartment of BioengineeringBox 355061, University of WashingtonSeattle, WA 98195-5061USASearch for other works by this author on:Henry C. LaiHenry C. LaiDepartment of BioengineeringBox 355061, University of WashingtonSeattle, WA 98195-5061USASearch for other works by this author on:
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Chapter 6: Development and Applications of the Comet-FISH Assay for the Study of DNA Damage and Repairp143-163ByValerie J. Mckelvey-Martin;Valerie J. Mckelvey-MartinBiomedical Sciences Research Institute, University of UlsterColeraineBT52 ISANorthern IrelandUKSearch for other works by this author on:Declan J. MckennaDeclan J. MckennaBiomedical Sciences Research Institute, University of UlsterColeraineBT52 ISANorthern IrelandUKSearch for other works by this author on:
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Chapter 7: Detection of DNA Damage in Different Organs of the Mousep164-176ByRitesh Kumar Shukla;Ritesh Kumar ShuklaInstitute of Life Sciences, Ahmedabad UniversityUniversity Road, NavrangpuraAhmedabad – 380 009IndiaSearch for other works by this author on:Mahima Bajpayee;Mahima BajpayeeShakti Sadan, 8, Arya NagarLucknow – 226 004IndiaSearch for other works by this author on:Alok DhawanAlok DhawanCSIR-Indian Institute of Toxicology ResearchVishvigyan Bhavan, 31, Mahatma Gandhi Marg, P.O. Box No – 80Lucknow – 226 001India[email protected]Search for other works by this author on:
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Chapter 8: Detection of DNA Damage in Drosophilap177-192ByAshutosh Kumar;Ashutosh KumarInstitute of Life Sciences, Ahmedabad UniversityUniversity RoadNavrangpuraAhmedabad – 380 009IndiaSearch for other works by this author on:Mahima Bajpayee;Mahima BajpayeeShakti Sadan8, Arya NagarLucknow – 226 004IndiaSearch for other works by this author on:Alok DhawanAlok DhawanCSIR-Indian Institute of ToxicologyVishvigyan Bhavan31-Mahatma GandhiMargP.O. Box – 80Lucknow – 226 001India[email protected]Search for other works by this author on:
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Chapter 9: The Comet Assay: Clinical Applicationsp193-237ByM. M. Piperakis;M. M. PiperakisDepartment of Biological Chemistry, John Innes Centre, Norwich Research ParkColney, NorwichUKSearch for other works by this author on:K. Kontogianni;K. KontogianniDepartment of Clinical Sciences, Liverpool School of Tropical MedicineUKSearch for other works by this author on:S. M. PiperakisS. M. PiperakisBiology Unit, Department of Pre-School Education, Faculty of Human Sciences, University of ThessalyVolosGreece[email protected]Search for other works by this author on:
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Chapter 10: Applications of the Comet Assay in Human Biomonitoringp238-263ByAndrew R. Collins;Andrew R. CollinsDepartment of Nutrition, Faculty of Medicine, University of OsloNorwaySearch for other works by this author on:Maria DusinskaMaria DusinskaNorwegian Institute of Air Research (NILU)KjellerNorwayResearch Base of Slovak Medical UniversityBratislavaSlovakiaSearch for other works by this author on:
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Chapter 11: Comet Assay in Human Biomonitoringp264-313ByMahara Valverde;Mahara ValverdeDepto. Medicina Genómica y Toxicología Ambiental. Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de MéxicoC.U. CP 04510México D.F.México[email protected]Search for other works by this author on:Emilio RojasEmilio RojasDepto. Medicina Genómica y Toxicología Ambiental. Instituto de Investigaciones Biomédicas, Universidad Nacional Autónoma de MéxicoC.U. CP 04510México D.F.México[email protected]Search for other works by this author on:
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Chapter 12: Use of Single-cell Gel Electrophoresis Assays in Dietary Intervention Trialsp314-353ByArmen Nersesyan;Armen NersesyanDepartment of Internal Medicine I, Institute of Cancer Research, Medical University of ViennaBorschkegasse 8a1090 ViennaAustria[email protected]Search for other works by this author on:Christine Hoelzl;Christine HoelzlDepartment of Internal Medicine I, Institute of Cancer Research, Medical University of ViennaBorschkegasse 8a1090 ViennaAustria[email protected]Search for other works by this author on:Franziska Ferk;Franziska FerkDepartment of Internal Medicine I, Institute of Cancer Research, Medical University of ViennaBorschkegasse 8a1090 ViennaAustria[email protected]Search for other works by this author on:Miroslav Mišík;Miroslav MišíkDepartment of Internal Medicine I, Institute of Cancer Research, Medical University of ViennaBorschkegasse 8a1090 ViennaAustria[email protected]Search for other works by this author on:Halh Al-Serori;Halh Al-SeroriDepartment of Internal Medicine I, Institute of Cancer Research, Medical University of ViennaBorschkegasse 8a1090 ViennaAustria[email protected]Search for other works by this author on:Tahereh Setayesh;Tahereh SetayeshDepartment of Internal Medicine I, Institute of Cancer Research, Medical University of ViennaBorschkegasse 8a1090 ViennaAustria[email protected]Search for other works by this author on:Siegfried KnasmuellerSiegfried KnasmuellerDepartment of Internal Medicine I, Institute of Cancer Research, Medical University of ViennaBorschkegasse 8a1090 ViennaAustria[email protected]Search for other works by this author on:
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Chapter 13: The Application of the Comet Assay in Aquatic Environmentsp354-368ByG. Frenzilli;G. FrenzilliDepartment of Human Morphology and Applied Biology, University of PisaPisaItalySearch for other works by this author on:B. P. LyonsB. P. LyonsSearch for other works by this author on:
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Chapter 14: The Alkaline Comet Assay in Prognostic Tests for Male Infertility and Assisted Reproductive Technology Outcomesp369-389BySheena E. M. Lewis;Sheena E. M. LewisReproductive Medicine, Queen's University of Belfast, Institute of Clinical ScienceGrosvenor RoadBelfast BT12 6BJNorthern IrelandUKSearch for other works by this author on:Ishola M. AgbajeIshola M. AgbajeReproductive Medicine, Queen's University of Belfast, Institute of Clinical ScienceGrosvenor RoadBelfast BT12 6BJNorthern IrelandUKSearch for other works by this author on:
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Chapter 15: The Comet Assay in Sperm—Assessing Genotoxins in Male Germ Cellsp390-456ByAdolf Baumgartner;Adolf BaumgartnerUniversity of Bradford, Division of Biomedical SciencesRichmond RoadBradfordBD7 1DPUK[email protected]Search for other works by this author on:Aftab Ali;Aftab AliUniversity of Bradford, Division of Biomedical SciencesRichmond RoadBradfordBD7 1DPUK[email protected]Search for other works by this author on:Charmaine Normington;Charmaine NormingtonUniversity of Bradford, Division of Biomedical SciencesRichmond RoadBradfordBD7 1DPUK[email protected]Search for other works by this author on:Diana AndersonDiana AndersonUniversity of Bradford, Division of Biomedical SciencesRichmond RoadBradfordBD7 1DPUK[email protected]Search for other works by this author on:
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Chapter 16: Genotoxic Effects in Peripheral Blood and Sperm in Humans in Healthy Individuals and Those with Disease Statesp457-476ByDiana Anderson;Diana AndersonDepartment of Genetic and Reproductive Toxicology, School of Medical Sciences, Faculty of Life Sciences, University of BradfordRichmond RoadBradford, West YorkshireBD71DPUK[email protected]Search for other works by this author on:Adolf Baumgartner;Adolf BaumgartnerDepartment of Genetic and Reproductive Toxicology, School of Medical Sciences, Faculty of Life Sciences, University of BradfordRichmond RoadBradford, West YorkshireBD71DPUK[email protected]Search for other works by this author on:Mojgan NajafzadehMojgan NajafzadehDepartment of Genetic and Reproductive Toxicology, School of Medical Sciences, Faculty of Life Sciences, University of BradfordRichmond RoadBradford, West YorkshireBD71DPUK[email protected]Search for other works by this author on:
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Chapter 17: Application of the Comet Assay in Nanotoxicologyp477-497ByMaria Dusinska;Maria DusinskaHealth Effects Laboratory, Department of Environmental Chemistry, NILU-Norwegian Institute for Air ResearchKjellerNorway[email protected]Search for other works by this author on:Elise Rundén-Pran;Elise Rundén-PranHealth Effects Laboratory, Department of Environmental Chemistry, NILU-Norwegian Institute for Air ResearchKjellerNorway[email protected]Search for other works by this author on:Naouale El Yamani;Naouale El YamaniHealth Effects Laboratory, Department of Environmental Chemistry, NILU-Norwegian Institute for Air ResearchKjellerNorway[email protected]Department of Nutrition, University of OsloOsloNorwaySearch for other works by this author on:Lise M. Fjellsbø;Lise M. FjellsbøHealth Effects Laboratory, Department of Environmental Chemistry, NILU-Norwegian Institute for Air ResearchKjellerNorway[email protected]Search for other works by this author on:Andrew CollinsAndrew CollinsDepartment of Nutrition, University of OsloOsloNorwayNorGenotech ASSkreiaNorwaySearch for other works by this author on:
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Chapter 18: Comet Assay – Protocols and Testing Strategiesp498-514ByAndreas Hartmann;Andreas HartmannNovartis Pharma AG, Preclinical SafetyWKL105.4. 09CH-4002 BaselSwitzerlandSearch for other works by this author on:Günter SpeitGünter SpeitUniversität Ulm, Institut für HumangenetikD-89069 UlmGermanySearch for other works by this author on:
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Chapter 19: Imaging and Image Analysis in the Comet Assayp515-550ByMark BrowneMark BrowneSearch for other works by this author on:
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Chapter 20: Statistical Analysis of Comet Assay Datap551-580ByDavid P. LovellDavid P. LovellSearch for other works by this author on:
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