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Imaging and image analysis provides the vital link between the “wet” comet assay and statistical analysis of results. Therefore, in this chapter we consider all aspects of the process including: fluorescent labelling of DNA; function, selection and care of microscope components; evolution of light sources; camera technologies; digital image processing leading to quantitative analysis of comet DNA distributions; database storage and management of results; and finally, data preparation for statistical analysis in the light of the recent OECD test guideline TG489.

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