Oxidative Folding of Proteins: Basic Principles, Cellular Regulation and Engineering
The formation of disulphide bonds is probably the most influential modification of proteins. These bonds are unique among post-translational modifications of proteins as they can covalently link cysteine residues far apart in the primary sequence of a protein. This has the potential to convey stability to otherwise marginally stable structures of proteins. However, the reactivity of cysteines comes at a price: the potential to form incorrect disulphide bonds, interfere with folding, or even cause aggregation. An elaborate set of cellular machinery exists to catalyze and guide this process: facilitating bond formation, inhibiting unwanted pairings and scrutinizing the outcomes. Only in recent years has it become clear how intimately connected this cellular machinery is with protein folding helpers, organellar redox balance and cellular homeostasis as a whole.
This book comprehensively covers the basic principles of disulphide bond formation in proteins and describes the enzymes involved in the correct oxidative folding of cysteine-containing proteins. The biotechnological and pharmaceutical relevance of proteins, their variants and synthetic replicates is continuously increasing. Consequently this book is an invaluable resource for protein chemists involved in realted research and production.
Oxidative Folding of Proteins: Basic Principles, Cellular Regulation and Engineering, The Royal Society of Chemistry, 2018.
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CHAPTER 1.1: Disulfide Bonds in Protein Folding and Stabilityp1-33ByMatthias J. Feige;Matthias J. FeigeDepartment of Chemistry and Institute for Advanced Study, Technische Universität München85748 GarchingGermany[email protected]Search for other works by this author on:Ineke Braakman;Ineke BraakmanCellular Protein Chemistry, Bijvoet Center for Biomolecular Research, Science for Life, Faculty of Science, Utrecht UniversityUtrechtThe Netherlands[email protected]Search for other works by this author on:Linda M. HendershotLinda M. HendershotDepartment of Tumor Cell Biology, St Jude Children’s Research HospitalMemphisTN 38105USA[email protected]Search for other works by this author on:
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CHAPTER 1.2: Techniques to Monitor Disulfide Bond Formation and the Reduction Potential of Cysteine–Cystine Couples In vitro and In vivop34-51ByChristian Appenzeller-Herzog;Christian Appenzeller-HerzogUniversitätsbibliothek UB Medizin, Universität Basel4051 BaselSwitzerlandSearch for other works by this author on:Jan RiemerJan RiemerMathematisch-Naturwissenschaftliche Fakultät, Institut für Biochemie, Universität zu Köln50674 KölnGermany[email protected]Search for other works by this author on:
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CHAPTER 1.3: Real-time Detection of Thiol Chemistry in Single Proteinsp52-80ByEdward C. Eckels;Edward C. EckelsIntegrated Program in Cellular, Molecular, and Biomedical Studies, Columbia University Medical CenterNew YorkNY 10032USASearch for other works by this author on:Daniel J. Echelman;Daniel J. EchelmanIntegrated Program in Cellular, Molecular, and Biomedical Studies, Columbia University Medical CenterNew YorkNY 10032USASearch for other works by this author on:Julio M. FernándezJulio M. FernándezSearch for other works by this author on:
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CHAPTER 1.4: Analysis of Disulfide Bond Formation in Therapeutic Proteinsp81-98ByDaniel WeinfurtnerDaniel WeinfurtnerSearch for other works by this author on:
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CHAPTER 2.1: Evolutionary Adaptations to Cysteine-rich Peptide Foldingp99-128ByM. M. Foged;M. M. FogedDepartment of Biology, Linderstrøm-Lang Centre for Protein Science, University of CopenhagenDK-2200 CopenhagenDenmark[email protected]Search for other works by this author on:L. EllgaardL. EllgaardDepartment of Biology, Linderstrøm-Lang Centre for Protein Science, University of CopenhagenDK-2200 CopenhagenDenmark[email protected]Search for other works by this author on:
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CHAPTER 2.2: In vitro Refolding of Proteinsp129-151ByJohannes BuchnerJohannes BuchnerSearch for other works by this author on:
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CHAPTER 2.3: Allosteric Disulfide Bondsp152-174ByAster E. Pijning;Aster E. PijningThe Centenary InstituteCamperdownNSW 2050AustraliaSearch for other works by this author on:Philip J. HoggPhilip J. HoggThe Centenary InstituteCamperdownNSW 2050AustraliaNational Health and Medical Research Council Clinical Trials Centre, University of SydneySydneyNSW 2006Australia[email protected]Search for other works by this author on:
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CHAPTER 3.1: Disulfide Bond Formation and Isomerization in Escherichia colip175-204ByGoran Malojčić;Goran MalojčićGoldfinch Biopharma, Inc.CambridgeMA 02142USASearch for other works by this author on:Rudi GlockshuberRudi GlockshuberSearch for other works by this author on:
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CHAPTER 3.2: Disulfide Bond Formation in Mitochondriap205-223ByJohannes M. Herrmann;Johannes M. HerrmannCell Biology, University of Kaiserslautern67663 KaiserslauternGermanySearch for other works by this author on:Katja HansenKatja HansenCell Biology, University of Kaiserslautern67663 KaiserslauternGermanySearch for other works by this author on:
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CHAPTER 3.3: Structural Insights into Disulfide Bond Formation and Protein Quality Control in the Mammalian Endoplasmic Reticulump224-248ByMasaki Okumura;Masaki OkumuraInstitute of Multidisciplinary Research for Advanced Materials, Tohoku UniversityAoba-kuSendai 980-8577JapanFrontier Research Institute for Interdisciplinary SciencesAoba-kuSendai 980-8578Japan[email protected]Search for other works by this author on:Satoshi Watanabe;Satoshi WatanabeInstitute of Multidisciplinary Research for Advanced Materials, Tohoku UniversityAoba-kuSendai 980-8577JapanSearch for other works by this author on:Kenji InabaKenji InabaInstitute of Multidisciplinary Research for Advanced Materials, Tohoku UniversityAoba-kuSendai 980-8577JapanSearch for other works by this author on:
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CHAPTER 3.4: Mechanisms of Oxidative Protein Folding and Thiol-dependent Quality Control: Tales of Cysteines and Cystinesp249-266ByTiziana Anelli;Tiziana AnelliDivision of Genetics and Cell Biology, Vita-Salute University, IRCCS Ospedale San Raffaele20132 MilanItaly[email protected][email protected]Search for other works by this author on:Roberto SitiaRoberto SitiaDivision of Genetics and Cell Biology, Vita-Salute University, IRCCS Ospedale San Raffaele20132 MilanItaly[email protected][email protected]Search for other works by this author on:
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CHAPTER 3.5: Disulfide Bond Formation Downstream of the Endoplasmic Reticulump267-284ByTal IlaniTal IlaniSearch for other works by this author on:
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CHAPTER 4.1: How Microbes Cope with Oxidative Stressp285-305ByFrancois Beaufay;Francois BeaufayDepartment of Molecular, Cellular, and Developmental Biology, University of MichiganAnn ArborMI 48109USA[email protected]Search for other works by this author on:Ursula JakobUrsula JakobDepartment of Molecular, Cellular, and Developmental Biology, University of MichiganAnn ArborMI 48109USA[email protected]Department of Biological Chemistry, University of Michigan Medical School, University of MichiganAnn ArborMI 48109USASearch for other works by this author on:
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CHAPTER 4.2: Disulfide Bond Formation in the Endoplasmic Reticulump306-333ByB. V. O. Oka;B. V. O. OkaInstitute of Molecular, Cellular and Systems Biology, College of Medical Veterinary and Life Sciences, University of GlasgowGlasgow G12 8QQUK[email protected][email protected]Search for other works by this author on:N. J. BulleidN. J. BulleidInstitute of Molecular, Cellular and Systems Biology, College of Medical Veterinary and Life Sciences, University of GlasgowGlasgow G12 8QQUK[email protected][email protected]Search for other works by this author on:
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CHAPTER 4.3: Redox Regulation of Hsp70 Chaperone Function in the Endoplasmic Reticulump334-354ByCarolyn S. SevierCarolyn S. SevierSearch for other works by this author on:
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CHAPTER 4.4: Thioredoxin and Cellular Redox Systems: Beyond Protein Disulfide Bond Reductionp355-378ByXiaoyuan Ren;Xiaoyuan RenDivision of Biochemistry, Department of Medical Biochemistry and Biophysics, Karolinska Institutet171 77 StockholmSweden[email protected]Search for other works by this author on:Jun Lu;Jun LuDivision of Biochemistry, Department of Medical Biochemistry and Biophysics, Karolinska Institutet171 77 StockholmSweden[email protected]School of Pharmaceutical Sciences, Southwest University400715 ChongqingChina[email protected][email protected]Search for other works by this author on:Arne HolmgrenArne HolmgrenDivision of Biochemistry, Department of Medical Biochemistry and Biophysics, Karolinska Institutet171 77 StockholmSweden[email protected]Search for other works by this author on:
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CHAPTER 5.1: Stabilization of Peptides and Proteins by Engineered Disulfide Bondsp379-398ByDouglas B. Craig;Douglas B. CraigKarmanos Cancer Institute, Department of Oncology, Wayne State UniversityDetroitMI 48201USASearch for other works by this author on:Alan A. DombkowskiAlan A. DombkowskiDepartment of Pediatrics, Division of Clinical Pharmacology, Wayne State University School of Medicine, Children’s Hospital of MichiganDetroitMI 48201USA[email protected]Search for other works by this author on:
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CHAPTER 5.2: Genetic Code Expansion Approaches to Introduce Artificial Covalent Bonds into Proteins In Vivop399-420ByMarko Cigler;Marko CiglerCenter for Integrated Protein Science Munich (CIPSM), Department of Chemistry, Synthetic Biochemistry Group, Technical University of Munich, Institute for Advanced Study85748 GarchingGermany[email protected]Search for other works by this author on:Tuan-Anh Nguyen;Tuan-Anh NguyenCenter for Integrated Protein Science Munich (CIPSM), Department of Chemistry, Synthetic Biochemistry Group, Technical University of Munich, Institute for Advanced Study85748 GarchingGermany[email protected]Search for other works by this author on:Kathrin LangKathrin LangCenter for Integrated Protein Science Munich (CIPSM), Department of Chemistry, Synthetic Biochemistry Group, Technical University of Munich, Institute for Advanced Study85748 GarchingGermany[email protected]Search for other works by this author on:
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